A Partitioned Approach to Protein Interaction Mapping
Byun, Yanga and Jeong, Euna and Han, Kyungsook (2002) A Partitioned Approach to Protein Interaction Mapping. In: Graph Drawing 10th International Symposium, GD 2002, August 26-28, 2002, Irvine, CA, USA , pp. 370-371 (Official URL: http://dx.doi.org/10.1007/3-540-36151-0_38).
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This is a brief description of a new program for drawing protein interactions in three-dimensional space. Our program divides nodes into three groups: biconnected subgraph in the center, terminal nodes at the outermost region, and the rest in between them. Experimental results show that the program efficiently generates a clear and aesthetically pleasing drawing of large-scale protein interaction networks and that it is an order of magnitude faster than other force-directed layouts.
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