A Partitioned Approach to Protein Interaction Mapping

Byun, Yanga and Jeong, Euna and Han, Kyungsook (2002) A Partitioned Approach to Protein Interaction Mapping. In: Graph Drawing 10th International Symposium, GD 2002, August 26-28, 2002, Irvine, CA, USA , pp. 370-371 (Official URL: http://dx.doi.org/10.1007/3-540-36151-0_38).

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Abstract

This is a brief description of a new program for drawing protein interactions in three-dimensional space. Our program divides nodes into three groups: biconnected subgraph in the center, terminal nodes at the outermost region, and the rest in between them. Experimental results show that the program efficiently generates a clear and aesthetically pleasing drawing of large-scale protein interaction networks and that it is an order of magnitude faster than other force-directed layouts.

Item Type:Conference Paper
Additional Information:10.1007/3-540-36151-0_38
Classifications:M Methods > M.999 Others
J Applications > J.999 Others
G Algorithms and Complexity > G.999 Others
P Styles > P.060 3D
ID Code:295

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